PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61243.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 388aa    MW: 42409.8 Da    PI: 6.3152
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.2e-09226273455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  PKA61243.1 226 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 273
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MEKETFFGRL DGLNWQMQSP ETAEPQPELS SGYLNINWNQ TIDQNAQFGS ALSSLASSPS  60
TNPLAAGTGD CIVIRELIGR LGSICSSGEI SPPSSHFQST NNPCYSTRLN SPKLNLSMIE  120
NPGGEGNAKK RKTAAKGKGK EVPLSSSITA ITNSPKSSNL KNSSLQTVGE DDTNAKRIKL  180
SESSEIEKQE GVDAAKKQEK DNSIKPAEPP KDYIHVRARR GQATDSHSLA ERVRREKISE  240
RMKLLQDLVP GCNKVTGKAV MLDEIINYVQ SLQRQVEFLS MKLATVNPQL DFNVNNFLPK  300
DLPQQAIYPL ELTSNSISFT NPSRGTPLTA NGLEIQGPVS LNMQLPLLPA SGDPSPQLGA  360
FWDDDLQTVI QMSFNQTQGW QIKSELLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.17e-61bHLH family protein