PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61299.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 230aa    MW: 25076.4 Da    PI: 8.736
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61299.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-1862110355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+G+r+++ +g+WvAeIr p++   r r++lg+f+ ae+Aa a++aa+ kl+g
  PKA61299.1  62 YRGIRQRH-WGKWVAEIRLPRN---RSRVWLGTFDKAEDAAVAYDAAAYKLRG 110
                 9******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MSGFPDLEQL IVLSLVSPSL ASTPPFTLLL HPLQPPQPAS TVHQFALSGF HHHPPAPARK  60
IYRGIRQRHW GKWVAEIRLP RNRSRVWLGT FDKAEDAAVA YDAAAYKLRG DFAQLNFPHL  120
KHQLHHRPES AAAVSLLEAK LKSFGFDGSP ASSGSSCSSS SCRGRVMGGG DEAPAKRQKV  180
AEMEGAPARA PAAKEEKVDW DADGLPLSRM PSHDMDSIWD SLLMTANSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.12e-30ERF family protein