PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61497.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 299aa    MW: 32271.1 Da    PI: 6.8689
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61497.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.5e-13147191347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
       PKA61497.1 147 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVVSRTPTQVASHAQKY 191
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MASPAAAGAA GEGRQEEEAR WSWEDDKALE NAIAAVPYPV EEEGADEAVA AAEEDRWLEA  60
VAARMLGKTL SQVKQQYKCL VEDVMAVEAG RIPTPPYPGD DSSSSRATGE QAAKNHHGLS  120
DRRGGFESGG QGKGSSKSDQ ERRKGIPWTE EEHRLFLLGL DKFGKGDWRS ISRNFVVSRT  180
PTQVASHAQK YFIRLNSMNR DRRRSSIHDI TNVNGGDVPS SQGPITGQVN GSPTATIGSS  240
MKHPPPPNMP TIGMYRPPMG HPVPSHMVSA VGTPVMLPPG HSPYVMPVAY PVPSSTMHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-56MYB family protein