PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA61512.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

bHLH

Protein Properties

Length: 288aa MW: 31837.4 Da PI: 8.6718

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA61512.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.1	2.5e-11	85	128	8	55
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er RR+++++ f++L llP++ p K +K+++ +Av YIk+L+ PKA61512.1 85 TERERRKKMRDMFANLHGLLPQL---P-SKADKSTVIDEAVSYIKELE 128 7*******************6...3.8**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MSEGGGEDQV GSLSWDKVQE WAFPKAESPG KGEPTKRKRK PRSTGERIST ARVLKRKSSC 60 DGEEGKLVTE GPKCGESDQE LHIWTERERR KKMRDMFANL HGLLPQLPSK ADKSTVIDEA 120 VSYIKELERT LQKLLRQKME RTHGGSAAGE PSPAAGSSAD TRESFMADQC RPSWPLGMIS 180 SPTPIAVPRV PACFQTWTTP NVVLSVAGGE AQIGICCRKK MGLLSVVFYV LQKHKIQVVS 240 ASFLSDYFRS MCMIQAHASG MSDQFLETLM IEDTYKSAVG EINFFLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	1e-41	bHLH family protein