PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61663.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family M-type_MADS
Protein Properties Length: 71aa    MW: 8167.55 Da    PI: 10.6176
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.99.9e-32958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krienk+nrqvtfskRrngi+KKA+ELSvLCdae+a+iifs +gkl+e+ 
  PKA61663.1  9 KRIENKINRQVTFSKRRNGIMKKAYELSVLCDAEIALIIFSGRGKLFEFG 58
                79**********************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    
MGRGRVELKR IENKINRQVT FSKRRNGIMK KAYELSVLCD AEIALIIFSG RGKLFEFGSP  60
EYVRSLDLGF N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.12e-34MIKC_MADS family protein