PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61758.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 482aa    MW: 52787.4 Da    PI: 5.6618
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS430.21.6e-131494771374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl+cA+ v++g+l +a+a+L+++s lasp+gd+mqR+a++fteALa+rl+r +++ly+al+p   +    + +++a++lf +++P+l++++l+ N
  PKA61758.1  49 LIHLLLNCATQVAAGNLDQANAFLEHISFLASPAGDAMQRIASFFTEALARRLLRFWPGLYRALNPDLPD---LAGAAHARRLFLDLCPFLRLCFLVSN 144
                 689*****************************************************************98...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                  aIlea+ege+ vH++D++ s ++QW++Llq+La Rp+gpp+lRiT+v++    +++ l++t++ L+k Ae+l++pf+fn+ v++ le+l++e+Lrvk+
  PKA61758.1 145 LAILEAMEGEKVVHVVDLGGSDPAQWVSLLQSLAGRPDGPPHLRITAVSD----RRDLLSHTASALTKEAEKLDIPFQFNA-VVSPLESLDFESLRVKT 238
                 **************************************************....9**************************.7**************** PP

        GRAS 199 gEalaVnlvlqlhrll.............................................................desvsles..erdevLklvksl 234
                 gEalaV++vlqlh+ll                                                             +++++++   + +++L  v++l
  PKA61758.1 239 GEALAVSSVLQLHSLLaadddfaggkpaksgtsgsfaagsisqqlqrmiqlnsgghgpfgellekevngispssessSSPLAIPPlaKMENFLASVWGL 337
                 *************************************************************************997744444444667899******** PP

        GRAS 235 sPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplseka 333
                 sPk++vv+eqe++hn+ ++ +rf++al++y+alfd+le+++pr+s er+ vE+ ++g+ei+n++aceg +r+erhe+le+W +r+e+aGF+ vp+s+  
  PKA61758.1 338 SPKIMVVTEQESNHNGLTLNDRFMDALNFYAALFDCLESTVPRQSPERSAVEKLMFGEEIKNIIACEGLDRKERHEKLERWIQRMEMAGFGRVPMSYCG 436
                 *************************************************************************************************** PP

        GRAS 334 akqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   qa+++l  ++ dgy+v+ee+gsl+++W++r+L+svSaWr
  PKA61758.1 437 LLQARRMLLGFGCDGYKVKEENGSLLFCWQERALYSVSAWR 477
                 ****************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    
MAGIADEVSS TVTSSSPLLS FMSISPSALS SPNAPWLREL KSDERGLFLI HLLLNCATQV  60
AAGNLDQANA FLEHISFLAS PAGDAMQRIA SFFTEALARR LLRFWPGLYR ALNPDLPDLA  120
GAAHARRLFL DLCPFLRLCF LVSNLAILEA MEGEKVVHVV DLGGSDPAQW VSLLQSLAGR  180
PDGPPHLRIT AVSDRRDLLS HTASALTKEA EKLDIPFQFN AVVSPLESLD FESLRVKTGE  240
ALAVSSVLQL HSLLAADDDF AGGKPAKSGT SGSFAAGSIS QQLQRMIQLN SGGHGPFGEL  300
LEKEVNGISP SSESSSSPLA IPPLAKMENF LASVWGLSPK IMVVTEQESN HNGLTLNDRF  360
MDALNFYAAL FDCLESTVPR QSPERSAVEK LMFGEEIKNI IACEGLDRKE RHEKLERWIQ  420
RMEMAGFGRV PMSYCGLLQA RRMLLGFGCD GYKVKEENGS LLFCWQERAL YSVSAWRSRR  480
YD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-176GRAS family protein