PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA61829.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 84aa    MW: 9101 Da    PI: 6.676
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA61829.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.51.1e-114883137
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37
                     rg W +eEd +l ++v+++G+ +W++Ia ++  gR++
       PKA61829.1 48 RGHWRPEEDVKLRELVARHGPQNWNLIALKLH-GRSG 83
                     899*****************************.**97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MGGFPLALQH PLFSSADRNG SGNEAGLEGS NGEDGSDSKD HDSKLCSRGH WRPEEDVKLR  60
ELVARHGPQN WNLIALKLHG RSGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17800.16e-17MYB family protein