PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA61831.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WOX

Protein Properties

Length: 204aa MW: 22485.1 Da PI: 9.7078

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA61831.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	50.3	3.9e-16	30	89	2	56
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 r+R+++++eq+ +Le+ F++ + +p+++e+ ++ + l ++ ++++++WFqNrR + + PKA61831.1 30 RSRWSPKPEQTVILESIFNSgTVNPQKNEIVKIRQLLenfgSIRDSNIFYWFQNRRSRSR 89 89***************99***********************************98 PP
2	Wus_type_Homeobox	96.2	2.8e-31	29	92	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW+P+peQ iLe++++sG+++P+k+ei +i++ Le++G i+d N+fyWFQNr++R+r +q PKA61831.1 29 TRSRWSPKPEQTVILESIFNSGTVNPQKNEIVKIRQLLENFGSIRDSNIFYWFQNRRSRSRSRQ 92 689**********************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MDRRTQEPKY PANGSPAAQP AGSSATGSTR SRWSPKPEQT VILESIFNSG TVNPQKNEIV 60 KIRQLLENFG SIRDSNIFYW FQNRRSRSRS RQRQLQEARS AAAAGGGGAL TVSSPESSLA 120 SSCLSTLSSS SDTVFINGIR TEVSAEPFDM RSTFGSAVFL IHSSGEVVQV DEYGVLLEGL 180 QVNERYYLVR YIKLSFSFSL SHLF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	93	RSRSRSRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	2e-23	WOX family protein