PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA61901.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Dof

Protein Properties

Length: 383aa MW: 39798.9 Da PI: 8.5582

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA61901.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.9	4.6e-38	119	179	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e +lkcprCdstntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+ PKA61901.1 119 PEPSLKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSK 179 67789*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MASVSDFFMG SNPSLPPVLV ERMHYLIVCV TPNNVAAHGR VVNPVALIGH TLSIDGQIWW 60 NQMGSSTHII LQHTPTGGSG DVHLFNPPPP PPPPLAAAGA AVRPGSMAER ARLTKIPQPE 120 PSLKCPRCDS TNTKFCYFNN YSLSQPRHFC KTCRRYWTRG GALRSVPVGG GCRRNKRSKS 180 SSSSSAAGSS TKSQHALAAA AASSPSSTAT SASSSGMLPS APLPFMPPPW HHLPDFGFCS 240 IPMPPAQMDN AEFTLGGSSS GCCAAGLEPW RIQQFPFLGG IVASASTSAP ALVPPGFYSF 300 EGEGIGGADG APGSYPGGDI AGKPAPVKAE VDASQSLNLP RQFLSVPRDE QQPYWSVTGA 360 GPGGGWAGDF SGYVNPSSTG GIL

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MASVSDFFMG SNPSLPPVLV ERMHYLIVCV TPNNVAAHGR VVNPVALIGH TLSIDGQIWW  60
NQMGSSTHII LQHTPTGGSG DVHLFNPPPP PPPPLAAAGA AVRPGSMAER ARLTKIPQPE  120
PSLKCPRCDS TNTKFCYFNN YSLSQPRHFC KTCRRYWTRG GALRSVPVGG GCRRNKRSKS  180
SSSSSAAGSS TKSQHALAAA AASSPSSTAT SASSSGMLPS APLPFMPPPW HHLPDFGFCS  240
IPMPPAQMDN AEFTLGGSSS GCCAAGLEPW RIQQFPFLGG IVASASTSAP ALVPPGFYSF  300
EGEGIGGADG APGSYPGGDI AGKPAPVKAE VDASQSLNLP RQFLSVPRDE QQPYWSVTGA  360
GPGGGWAGDF SGYVNPSSTG GIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	9e-45	Dof family protein