PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62027.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 237aa    MW: 24546.6 Da    PI: 8.6414
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.52.4e-20113147135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++
  PKA62027.1 113 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 147
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MLRWCGNGSA AAAAGGVPAS PCSFSMLFPV PGVPAEETIA EAAASSSVDC TLSLGTPYTR  60
HQSSSSPAMR RSPSVSSSLC LDILPQSSSK QMPPASSASS AGAGDPFLLA RRCANCDTTS  120
TPLWRNGPRG PKSLCNACGI RYKKEERRAA ASSTTTTPPA AAAAAALVHG DGFSYGCGRG  180
GQQHPWSYYP PPPPPPAKNP VISIYGGEQG DLPWRMNVVP AQFPAVGERS SSLFQYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36620.16e-25GATA family protein