PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA62099.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 226aa MW: 25243.4 Da PI: 8.7021

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA62099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94.3	9.5e-30	25	78	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rW+ eLH+rFveav++LGG+ kAtPk+il lm+vkgL l+hvkSHLQ+YR+ PKA62099.1 25 PRIRWNGELHRRFVEAVDSLGGHSKATPKRILSLMGVKGLLLSHVKSHLQMYRS 78 8****************************************************7 PP
2	Myb_DNA-binding	42.4	1.6e-13	28	77	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW e++ ++v+av lGg+ t+k+I + mg kg+ l ++ks++q+y+ PKA62099.1 28 RWNGELHRRFVEAVDSLGGHskaTPKRILSLMGvKGLLLSHVKSHLQMYR 77 9***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MMSMKDVTMV ACERRVRQYS RSETPRIRWN GELHRRFVEA VDSLGGHSKA TPKRILSLMG 60 VKGLLLSHVK SHLQMYRSGT TNSQNNLSKL NASKSQRKLK TVNPNHGYLE DSIYSTTVSH 120 KIYYGSTFEG VQLHQESKTK NCIDVREGTK EPQINIPGLN GSSHAWNYEM GCEQTLSSSS 180 SMEFDGSSTE DQIIPISLTS SACQKEDISN GINLELSISL NSYCSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	3e-24	G2-like family protein