PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62116.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 313aa    MW: 35397.2 Da    PI: 8.0648
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.72.2e-53121421128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                 lppGfrFhP+deelv++yLkk+++g +     + + ++ +vd++k+ePwdLp+++  + kewyfFs rd+kyatg+r+nrat+sgyWkatgkd++v + 
  PKA62116.1  12 LPPGFRFHPRDEELVCDYLKKRISGLDvngaSHGFPAMIDVDLNKCEPWDLPEMACVGGKEWYFFSLRDRKYATGHRTNRATQSGYWKATGKDRPVSR- 109
                 79************************95544333347999************7667799*************************************99. PP

         NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 k++lvg++ktLvfy+grapkg+ktdW+mhe+r+
  PKA62116.1 110 KEALVGMRKTLVFYQGRAPKGKKTDWIMHEFRM 142
                 999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MTSYLSMTEE SLPPGFRFHP RDEELVCDYL KKRISGLDVN GASHGFPAMI DVDLNKCEPW  60
DLPEMACVGG KEWYFFSLRD RKYATGHRTN RATQSGYWKA TGKDRPVSRK EALVGMRKTL  120
VFYQGRAPKG KKTDWIMHEF RMEAIPTNLS KISIQDWVLC RVFFKSRSVN SRPLSAARTT  180
IADSFCCYDS GSSSLPPLME TYANFSHYNH NNFLQTRFMN LEAGYEHVPC FSNPLNSTAS  240
RHPAPSLPLD HAVAQLASDV APSLTSPRVD FDKKMIKVVL SNLTKFEDEQ LTKEAAMNFG  300
DGGVDISYFQ LGE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.29e-86NAC family protein