PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62194.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 339aa    MW: 37320.9 Da    PI: 4.9533
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62194.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.38.5e-062272641254
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  PKA62194.1 227 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 264
                 677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MADEYQLGPL CSEILWSSSR CADMFSCSTA FASAGDLAGS FGLFPQDAET AAFSNMPTSG  60
DNSPGSSATL PDFYEPQFFV QIPEDSPPAM DSPIFPSVND HWSQSFLFGD KSDDPLEEIL  120
AESAAMDNQQ YFCSSFSFPP LLHHSTGSEN LRRGISGDLP RPSLPATRPP IPKPFPEPLT  180
QQPNFANDLR FKRKPAINAE ASTSSSFPAA KRPRIETPSP LPTFKVRKEK LGDRITALQQ  240
LVSPFGKTDT ASVLHEAIEY IKFLHEQVRV LSNPYLRNER QVRQQHAIKN AQSSKEEGEG  300
RKADLCSRGL CLAPISSTFA VINEIPPLDF WPLSYNVGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.33e-43bHLH family protein