PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA62282.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 851aa MW: 97977 Da PI: 7.0973

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA62282.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54	5.5e-17	90	173	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA ++GF v ++ks+ s ++g + + +vCs+ g+ + + r r++ +t+C+a+l k++ dg +v + +leHnH+++ PKA62282.1 90 NFYKQYALHIGFGVAVKKSSFS-KSGVCRRLILVCSRGGRGRADACY-----RARQTAKTNCEAMLAAKLWGDGLLHVVEAKLEHNHPVS 173 6***************9999.8888***********99999.....99999****************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 851 aa Download sequence
MAECSVIEAP LDANDEICDV KEAELNATVA TDATVTPQEM LNDLFDNNKI KEFTAIDDDN 60 EEKGEKVGLN VEDKTPRVGM VFRTYEEVSN FYKQYALHIG FGVAVKKSSF SKSGVCRRLI 120 LVCSRGGRGR ADACYRARQT AKTNCEAMLA AKLWGDGLLH VVEAKLEHNH PVSPSTAQFL 180 RCYQKMTHVM NLVQPAISRN SHVVEKDCGS ATEIGRLKLG EGDNEAIHQF FTRMQNKNPN 240 FFYSVELDQH GRMRNVFWAD ARSRNAYQYY GDVVAFDTTC LTEKYDMPLV LFTGMDHHGQ 300 SVLLGCGLLS EESFESYVWL FKIWLICMMS FHPNALITDQ CKTIQDAVTQ VFPGVRHRIC 360 LYHILKKLPE KLRGYAEFKA IKKALKKLAF DSLRVDEFEE EWKKMIREFG LETNEWLIEL 420 YEKRHLWVPL FLKDTFWAGM SITQRGESLG TYFDGCVYPR TTIKHFFSKY ETIIQSKCKK 480 EVHADSESFQ KTPLIASKFY MEEQLSKLYT INMFQKFQDE LKATMYCHAT PVKTDGPIHI 540 FEVKECSYME NGKKTESKDH EVLFNAEELA VQCICGFFHF NGILCRHSLS VFKLQQVFEI 600 PSHYILNRWK KDFKRLHILA RYSDDIIPDN LVERYDYLSM RFLQLVEVGF LSEDRYQLAM 660 KLIRELEKSL LDEPGCKNRQ TRILSFEAQS SNCIQDLLAS QFVIPEGSKT PNSMLAKRRG 720 RPPKKMKESN IEALVRTNKE QDFLRSSLVG NNSSLLQSAS TSSHLEAHIG SQGGIDLMEE 780 VNPNELSFGT HFGMHVNHQP QMGGQARIQP NNFFQGQFEQ QTLGTSSRMQ WLYHMYQEDQ 840 IPKATCARRT E

Sequence ? help Back to Top

Protein Sequence Length: 851 aa Download sequence

MAECSVIEAP LDANDEICDV KEAELNATVA TDATVTPQEM LNDLFDNNKI KEFTAIDDDN  60
EEKGEKVGLN VEDKTPRVGM VFRTYEEVSN FYKQYALHIG FGVAVKKSSF SKSGVCRRLI  120
LVCSRGGRGR ADACYRARQT AKTNCEAMLA AKLWGDGLLH VVEAKLEHNH PVSPSTAQFL  180
RCYQKMTHVM NLVQPAISRN SHVVEKDCGS ATEIGRLKLG EGDNEAIHQF FTRMQNKNPN  240
FFYSVELDQH GRMRNVFWAD ARSRNAYQYY GDVVAFDTTC LTEKYDMPLV LFTGMDHHGQ  300
SVLLGCGLLS EESFESYVWL FKIWLICMMS FHPNALITDQ CKTIQDAVTQ VFPGVRHRIC  360
LYHILKKLPE KLRGYAEFKA IKKALKKLAF DSLRVDEFEE EWKKMIREFG LETNEWLIEL  420
YEKRHLWVPL FLKDTFWAGM SITQRGESLG TYFDGCVYPR TTIKHFFSKY ETIIQSKCKK  480
EVHADSESFQ KTPLIASKFY MEEQLSKLYT INMFQKFQDE LKATMYCHAT PVKTDGPIHI  540
FEVKECSYME NGKKTESKDH EVLFNAEELA VQCICGFFHF NGILCRHSLS VFKLQQVFEI  600
PSHYILNRWK KDFKRLHILA RYSDDIIPDN LVERYDYLSM RFLQLVEVGF LSEDRYQLAM  660
KLIRELEKSL LDEPGCKNRQ TRILSFEAQS SNCIQDLLAS QFVIPEGSKT PNSMLAKRRG  720
RPPKKMKESN IEALVRTNKE QDFLRSSLVG NNSSLLQSAS TSSHLEAHIG SQGGIDLMEE  780
VNPNELSFGT HFGMHVNHQP QMGGQARIQP NNFFQGQFEQ QTLGTSSRMQ WLYHMYQEDQ  840
IPKATCARRT E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-139	FAR1 family protein