PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA62490.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 494aa MW: 52766.5 Da PI: 6.2781

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA62490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98	5.9e-31	266	324	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ PKA62490.1 266 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRSILITTYEGNHNHP 324 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MGSPPMEKRR GGLTLDPNPF LAGALERKLS LDSGSAASSA FVFPPSRYEE RSFVCEMDFF 60 SGERSGLETP SVPSLDLKIK KDDLSINTGL QLANTGSDHS TVEEEDDKEG KCEVAVMEAE 120 LRRATEENQR LRGMLSQVTS NYNKLHMQII SIMQQRSHQI IPQIQQGEEE DGMPRRFTDV 180 GRGAEADEPS HSSTDGSSRD RSPSPMNNAE KVTIAGDGSG VFGEERPEKP GKLLNFVSKP 240 ADQAQEATMR KARVSVRARS EAPMISDGCQ WRKYGQKMAK GNPCPRAYYR CTMAAGCPVR 300 KQVQRCAEDR SILITTYEGN HNHPLPPAAI AMASTTSAAA SMLLTGSMPS SDALMNPSFL 360 ARTILPCSAT MATISASAPF PTVTLDLTQS PNSLQLLRPP VPQVFGQTMY SNQSKFSGLQ 420 MSAPDLEKAG PPAARSLADK MSAVTAAITA DPNFTAALAA AIKSIIGGGP LSGGNDSGGN 480 DMSPPAGWGF PATS

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MGSPPMEKRR GGLTLDPNPF LAGALERKLS LDSGSAASSA FVFPPSRYEE RSFVCEMDFF  60
SGERSGLETP SVPSLDLKIK KDDLSINTGL QLANTGSDHS TVEEEDDKEG KCEVAVMEAE  120
LRRATEENQR LRGMLSQVTS NYNKLHMQII SIMQQRSHQI IPQIQQGEEE DGMPRRFTDV  180
GRGAEADEPS HSSTDGSSRD RSPSPMNNAE KVTIAGDGSG VFGEERPEKP GKLLNFVSKP  240
ADQAQEATMR KARVSVRARS EAPMISDGCQ WRKYGQKMAK GNPCPRAYYR CTMAAGCPVR  300
KQVQRCAEDR SILITTYEGN HNHPLPPAAI AMASTTSAAA SMLLTGSMPS SDALMNPSFL  360
ARTILPCSAT MATISASAPF PTVTLDLTQS PNSLQLLRPP VPQVFGQTMY SNQSKFSGLQ  420
MSAPDLEKAG PPAARSLADK MSAVTAAITA DPNFTAALAA AIKSIIGGGP LSGGNDSGGN  480
DMSPPAGWGF PATS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-114	WRKY family protein