PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA62521.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TCP

Protein Properties

Length: 313aa MW: 32572.4 Da PI: 7.9594

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA62521.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.9	2.9e-41	24	165	2	136
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..kaaksaaks 97 +++k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLl qa+pai+++tgt++++a+++ ++s +ss+s+ s++ k+a+ + ++ PKA62521.1 24 PAAKRSSKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLHQAEPAIIAATGTGTIPANFSsLNVSLRSSSSSLSAPpsKSAPLSFHH 122 6789*****************************************************************999877777777776666665555555578 PP TCP 98 kksqksaasalnlakesr....akarararertrekmriknkl 136 ++ ++++s l +++ + + + r+r re+ ++++++ PKA62521.1 123 DFDAADPSSILGFHHPQFgatpETDDTYLRKRFREDLFKDEQQ 165 8888888888888884332222333333555666666655554 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MATTAKEAIA PDPKKMAVAV LPQPAAKRSS KDRHTKVDGR GRRIRMPAAC AARVFQLTRE 60 LGHKSDGETI EWLLHQAEPA IIAATGTGTI PANFSSLNVS LRSSSSSLSA PPSKSAPLSF 120 HHDFDAADPS SILGFHHPQF GATPETDDTY LRKRFREDLF KDEQQQEGEG RPAARGEPSS 180 SPSSAAAMWA MAPGSGGGGA FWMLPVTAGS TAPAIAAAAT ASGNTIQAPL QFMSRINSMG 240 AMPIGSMLPA AQHLGLGIAE SNLGMLATLN SYNRAAVAGG HIMNSDHGGP VDHRQQPQGS 300 DGGGDGHHTS NSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	5e-42	TCP family protein