PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62559.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 177aa    MW: 19104.9 Da    PI: 11.3862
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62559.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.11.2e-142270355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr +k +grWvAeIr+p++   r r +lg++  +  Aa+a++ a   l+g
  PKA62559.1 22 YRGVRMRK-WGRWVAEIREPKK---RSRLWLGSYAAPVAAARAYDTAVYLLRG 70
                9*****99.**********965...5*********************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MEGDCCSPAG ESRRPPTAER AYRGVRMRKW GRWVAEIREP KKRSRLWLGS YAAPVAAARA  60
YDTAVYLLRG RSARLNFPED LAADEAASGV SGSLSPAAIR RKASEVGARV DAVQQQKQLG  120
PRSPPPTLLP PPAGGGGAEA GPQRASRGPN GSRRVKKIEV CSLTILLSHF SIFILRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06746.11e-31ERF family protein