PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA62570.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Trihelix
Protein Properties Length: 308aa    MW: 35543.8 Da    PI: 7.1667
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA62570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix81.71e-2562143186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W  qe+++Li++r ++e+++   +++k+lWe+vs +mre+g++r++ qCk+kw+nl +ryk  ++ + ++     ++cp+fd+l+
  PKA62570.1  62 QWGTQETRELIAIRADLERDFTVVRRNKTLWEAVSLRMREKGYRRTADQCKCKWKNLVNRYKGKETADAEN----GRQCPFFDELQ 143
                 7*************************************************************999888873....568******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MMMGGGEGDP IGGRMGMVGG FPLQVNPPQA TAGEMVGTSG GAVSGGGGGG GGQRGKEEKV  60
AQWGTQETRE LIAIRADLER DFTVVRRNKT LWEAVSLRMR EKGYRRTADQ CKCKWKNLVN  120
RYKGKETADA ENGRQCPFFD ELQAVFTERA RNMQRLLLES ESGTPHSKKK LRKLSADRSS  180
DEFSDEEDED EDDSDEERST RSRKKKTRTT TDKSRAAVSI QDLLQDFLQQ QQRIEANWWA  240
IIDRRAQERQ RCELEWRQSM EKMERERLML EQEWRDREEN RRMREESRAE KRDALLTTLL  300
NKLMQDDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.12e-30Trihelix family protein