PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA62791.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 283aa MW: 31211.9 Da PI: 7.2666

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA62791.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.7	1.7e-30	31	81	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kprlrWt eLH+rFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQ PKA62791.1 31 KPRLRWTVELHDRFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ 81 79************************************************9 PP
2	Myb_DNA-binding	67.5	2.4e-21	33	82	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r+rWT e+++++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++q PKA62791.1 33 RLRWTVELHDRFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQV 82 89**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MFPSKKPSMN SHERPICVQG DSGLVLTTDP KPRLRWTVEL HDRFVDAVTQ LGGPDKATPK 60 TIMRVMGVKG LTLYHLKSHL QVQKHLQMRI EAQGKYMQSI LEKACQTLAG ENAAAAASGC 120 YKPGLMMEVA GAMKDIGSPV TFPSLQDLHL FNSDHLDHLP DGFFPSTSET LCLGPKKRPN 180 SYSTPNGKCP MTWADELRLQ EFELPEEALK SPVNGGLDIE SMTREVYEAK PMLSGDSAGE 240 NIHEEAMKLE RPSPRRAQVP APEMMSPMIR GGVLNQARNL SYG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-60	G2-like family protein