PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA62851.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

HSF

Protein Properties

Length: 369aa MW: 40310.2 Da PI: 5.7078

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA62851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	101.6	6.8e-32	27	148	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT....................X..T CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks....................k..e 76 Fl+k+y++++d++++++isw+e+g++f+v+ + efa+++Lp+yFkh+nf+SFvRQLn+Y + ++ +++ +s k + PKA62851.1 27 FLTKTYQLVDDPAIDDVISWNEDGSTFIVWRPPEFASDLLPRYFKHNNFSSFVRQLNTYVRSLSDGSSGLIASrlwvwslaywmclfefqgfrKivP 123 9********************************************************87666666666555999999999999988877661569 PP TSEEEEESXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 77 kiweFkhksFkkgkkellekikrkk 101 + weF+++sF++g+k+ll++i+r+k PKA62851.1 124 DRWEFANDSFRRGEKHLLCEIHRRK 148 *********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
METPPQMEQT SMATGTIEGQ RSLPTPFLTK TYQLVDDPAI DDVISWNEDG STFIVWRPPE 60 FASDLLPRYF KHNNFSSFVR QLNTYVRSLS DGSSGLIASR LWVWSLAYWM CLFEFQGFRK 120 IVPDRWEFAN DSFRRGEKHL LCEIHRRKIW QAASGPSQSQ ASAPPAATAL QAVPLAAPVN 180 RTASPANSGD EQVVSSNSSP AAPPPWSSAC SSAAELREEN ERLRRENFQL SQELSQIKSL 240 CNNILQLMSK YASSQQLAGG LSAETSPELE LIQSSGSAKD PEPAAPVKTE ANYGCPRLFG 300 VAIGAKHART PDGEKPRRLL PIEVKSEPAD LASDQSEEAA TAAPNHQPCL LCSPRPHQTL 360 CNGGIGAGT

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

METPPQMEQT SMATGTIEGQ RSLPTPFLTK TYQLVDDPAI DDVISWNEDG STFIVWRPPE  60
FASDLLPRYF KHNNFSSFVR QLNTYVRSLS DGSSGLIASR LWVWSLAYWM CLFEFQGFRK  120
IVPDRWEFAN DSFRRGEKHL LCEIHRRKIW QAASGPSQSQ ASAPPAATAL QAVPLAAPVN  180
RTASPANSGD EQVVSSNSSP AAPPPWSSAC SSAAELREEN ERLRRENFQL SQELSQIKSL  240
CNNILQLMSK YASSQQLAGG LSAETSPELE LIQSSGSAKD PEPAAPVKTE ANYGCPRLFG  300
VAIGAKHART PDGEKPRRLL PIEVKSEPAD LASDQSEEAA TAAPNHQPCL LCSPRPHQTL  360
CNGGIGAGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	6e-60	HSF family protein