PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63039.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB
Protein Properties Length: 335aa    MW: 37192.5 Da    PI: 7.3608
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.99.7e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l++ ++++G g+W+++++  g+ R++k+c++rw +yl
       PKA63039.1 14 KGLWSPEEDEKLLKHITKYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61
                     678*******************************************97 PP
2Myb_DNA-binding44.73.1e-1467110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg ++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++
       PKA63039.1  67 RGTFSQQEENLIIELHAALGNR-WSQIAAQLP-GRTDNEIKNLWNS 110
                      899*******************.*********.*********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MGRHSCCYKQ KLRKGLWSPE EDEKLLKHIT KYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQQEENLIIE LHAALGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQRG  120
IDPNTHKPLA EVGELQEKEK AASAGASDPS QKALLPTQSN SSAAGFFSLP NLTYSPDCTQ  180
QLWFNQSNSS SEFNYNSISS LLPSVPSSNL SASMEKPLTT LLMENSPSGF FWEGGNSSNS  240
GASSGNSEPL LNGGMFPWSQ LLPEGGEAQA QLQWPEYFNS SIPSSTGTQG QYQEAYNGIK  300
EEDQFEIDGL GLWLQNQQRP SSGVYGKDYQ RDLAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09540.12e-90MYB family protein