PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63123.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB
Protein Properties Length: 299aa    MW: 33603.5 Da    PI: 7.747
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.14.1e-132976247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g+WT++E +l+ +a + +  +   +W+++a++++ g+t +++ks++q++
       PKA63123.1 29 GNWTQQENKLFENALAHFDRDtpdRWEKVAEMIP-GKTVEDVKSHYQDL 76
                     89*****************99*************.************86 PP
2Myb_DNA-binding33.78.4e-11136185347
                      SS-HHHHH.....HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEde.....llvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++     +++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
       PKA63123.1 136 PWTEEEHKyytilRFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 185
                      8******666666************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MTNSWMEVLT PNSGYLSNSN WILGEKSSGN WTQQENKLFE NALAHFDRDT PDRWEKVAEM  60
IPGKTVEDVK SHYQDLEEDV SYIEAGLIPF PGYSSSSFTL DWENECGFDS AKQAYCASGK  120
RSGGRLADHE RKKGVPWTEE EHKYYTILRF LMGLKKYGKG DWRNISRNFV VTRTPTQVAS  180
HAQKYFIRLN SGGKDKRRAS IHDITTVNME ENRPPSPSQP SGVTMQSSST TAAGSLEQFS  240
VVVDSKQPNE AARVFSPTNN TQFIMSRYGV HPYGMKLQVQ NLHDGSLSGS IVGHKGVLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.12e-93MYB family protein