PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63241.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WOX
Protein Properties Length: 248aa    MW: 27572.2 Da    PI: 10.0009
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.71e-181877357
                --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                +R+++ keq+ +Le l+ +  r+p+ae++++++ kl     ++ ++V++WFqN++a++++
  PKA63241.1 18 SRWNPAKEQIAVLEGLYGQgIRTPTAEQIQQITVKLqefgAIEGKNVFYWFQNHKARQRQ 77
                7*****************99**************************************97 PP
2Wus_type_Homeobox1123.1e-361779365
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                        +RW+P +eQi +Le ly +G+rtP++e+iq+it +L+e+G+ie+kNVfyWFQN+kaR+rqkq
         PKA63241.1 17 GSRWNPAKEQIAVLEGLYGQGIRTPTAEQIQQITVKLQEFGAIEGKNVFYWFQNHKARQRQKQ 79
                       68***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEDQDQKFSS PAASPAGSRW NPAKEQIAVL EGLYGQGIRT PTAEQIQQIT VKLQEFGAIE  60
GKNVFYWFQN HKARQRQKQK QETYAYFSRL LHRHHRPPPP PPVPLPSSLP SQPGANVICA  120
PFYLQVPHVA GVGIYQQKHP NGYFAGAPAK KKPRPELVRT NRLVVDMSDL QPFQKLNQRD  180
HHDHGVAGGG DTHETLQLFP LRPTGVLEEK SGGSSASMGS EGRLEDELGL KERAGGLPFF  240
NLFGVRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.12e-34WOX family protein