PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63252.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 173aa    MW: 18560.2 Da    PI: 8.2441
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.00144870123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C++ F++   L  H  +H
  PKA63252.1 48 FECKTCSRQFPTFQALGGHRASH 70
                89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MVGTRRPRDD QSRGEEGGTA VDAALIAGDG DESMSSAAAA AAAAERVFEC KTCSRQFPTF  60
QALGGHRASH KKQRLMGEMP VRNLRIIKTR AHECSICGLE FDVGQALGGH MRRHRAPQAP  120
AVAAPAAGGG EGGRRMMWMD LNLTPMENDL EMKKMTGVGG RIGDWIPAVD CFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.12e-24C2H2 family protein