PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63298.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 224aa    MW: 24999 Da    PI: 7.547
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.11.7e-175193246
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     gr T+eE+ l+vd++ ++G++ W++Iar+++ gRt++++k++w++
       PKA63298.1 51 GRLTPEEERLIVDVHSRWGNR-WSRIARMLP-GRTDNEIKNYWRT 93
                     789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MAQHALDHIF CYDLLSLLSL PSPSVLIGLN RTGKSCRLRW VNYLHPGLKH GRLTPEEERL  60
IVDVHSRWGN RWSRIARMLP GRTDNEIKNY WRTRMRKKAQ ERRNLLTMAG PFPSSSSSSS  120
SSTSSSSSLG SLTNTTSSEN AKEVKGFEEG VNGYIIDEIW NDLASPGASG LFSLEGCNDF  180
PQASATTLSV HSPMWDYTES PPWSVGDDLK NFPIEWCSSS LFAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.23e-45MYB_related family protein