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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PKA63322.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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| Family | bZIP | ||||||||
| Protein Properties | Length: 182aa MW: 19718.4 Da PI: 10.3398 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 44.9 | 2.6e-14 | 1 | 50 | 10 | 59 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59
+ +NRe+ArrsR+RK+a + eLe v +L eN++L k+l +++++ +
PKA63322.1 1 MLSNRESARRSRRRKQAHLSELEAQVSQLRVENSSLLKRLTDINQKYTEA 50
579***********************************999999988765 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 182 aa Download sequence |
MLSNRESARR SRRRKQAHLS ELEAQVSQLR VENSSLLKRL TDINQKYTEA AVDNRILKAD 60 VETLRAKVKM AEDTVKRVTA SIPLTASPSE ATSDAAIPIQ DDPTRFFAPP TPNPGIQNCM 120 PEICSIGGVT GKMVRTASMQ RVASLEHLQK RICGGPATGG GLPWDGAAWG PQISGNGSNR 180 QN |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 9 | 16 | RRSRRRKQ |
| 2 | 11 | 16 | SRRRKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G28770.1 | 3e-40 | bZIP family protein | ||||




