PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA63354.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 220aa MW: 24112.7 Da PI: 6.6659

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA63354.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.1	2.8e-31	114	172	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K vk+s++pr+YYrC+s+gC+vkk+ver+++dp++v++tYeg Hnh+ PKA63354.1 114 LDDGFKWRKYGKKAVKNSPNPRNYYRCASNGCEVKKRVERDRNDPRFVITTYEGMHNHQ 172 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MAALREFTEL GSFLSSLKAA EFCAAGFDGS PAGSGTAAGE PPEFDVQDYI GFDDGRLMGD 60 VVAGEIETRV LPMGGGGGGP SADEGEKNCE EVKRKKVECG CRIGFRTESE VEILDDGFKW 120 RKYGKKAVKN SPNPRNYYRC ASNGCEVKKR VERDRNDPRF VITTYEGMHN HQTPDATHYS 180 FLHHQLPDSS SPRDPRGQMT PSVPRVRGRS SSFSPSSSYT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	129	KRKKVECGCRIGFRTESEVEILDDGFKWRKYGKKAVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	3e-39	WRKY family protein