PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA63360.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB

Protein Properties

Length: 246aa MW: 27013.3 Da PI: 7.074

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA63360.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.5	1.8e-14	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l ++ +G g +W + +++ g++R++k+c++rw++yl PKA63360.1 14 KGPWSPEEDAALRSFIHNHGIGgNWISLPKKAGLKRCGKSCRLRWLNYL 62 79****************999**********************97 PP
2	Myb_DNA-binding	46.5	8.3e-15	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd++++ + G++ W+ Ia++++ gRt++++k++w++ PKA63360.1 69 GCFTKEEDDIILSLYSNIGSR-WSVIASKLP-GRTDNDVKNHWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAALRSFIH NHGIGGNWIS LPKKAGLKRC GKSCRLRWLN 60 YLRPNIKHGC FTKEEDDIIL SLYSNIGSRW SVIASKLPGR TDNDVKNHWN TKLKKRMIEA 120 QPQVLRNQIS QAMFSGFSVL GGSSSNGVIM STEAPASQSL SSGDDEDSPA MKQGLRGEYD 180 QNGLLLTDLD FGSSNTDLLS CPGFLWADDV CSEEGFIGEL FFHNFTGNEI SSNGVRSHDA 240 SPSKEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	8e-71	MYB family protein