PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63386.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 234aa    MW: 24804.9 Da    PI: 6.1261
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63386.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.5e-1873121355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  PKA63386.1  73 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 121
                 9****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MADHRSFSEQ GSSSSSGIAV SMSPTSSSPA SSTYKLTPPE PSLTPDPMTS HAGGAGGGGS  60
MKRSRDGSKN PAYRGVRMRA WGKWVSEIRE PRKKSRIWLG TFPTPEMAAR AHDVAALSIK  120
GSAAILNFPD LVASLPRPAT LSPRDVQAAA AKAAAMEPMA PTAPSAPSLA ETPKSPDSLG  180
EIVELPRLGG SFLDAAGEFI YRETFDSWPF TEDCDLFSDP LSPPNHFEAI LWDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-50ERF family protein