PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63395.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 349aa    MW: 38071.7 Da    PI: 8.2358
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.62.5e-12101146247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++W++eE+  ++ + + lG+g+W+ I+r +  +Rt+ q+ s+ qky
       PKA63395.1 101 NPWSEEEHRMFLLGLQTLGKGDWRGISRNFVVTRTPTQVASHAQKY 146
                      68*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MTRRCSHCSS NRESSRSCSG SSGVKLFGVR IVEGVRAMKK SASMGSLSSA AACYTGSPTQ  60
SCSMSSDPAR DHADGPSGYA SDDLGHASCS PNCRNERKKG NPWSEEEHRM FLLGLQTLGK  120
GDWRGISRNF VVTRTPTQVA SHAQKYFIRQ TNSSRRKRRS SLFDMVPELP RDQVPVVEEQ  180
LMLHSRSNES ANANSLYASL HLGNALEPQH TDAAMRRPVP LPEPELKENI LCSNAPSAVV  240
PTYYPTLVPL AFPFWPPNLP PPINEEEAGE IHEVFKPTPV LPKDLVNADQ LADMSNLSIR  300
DGAGGHMVPS ALSIKLHETS SSRQSAFHTN PSFSRPDLSQ GSNNAIHAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.16e-59MYB_related family protein