PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA63433.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 198aa MW: 22225.4 Da PI: 9.6948

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA63433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	84.3	1.3e-26	145	195	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+r++W p+LH +F++a+e+LGGs+ AtPk+i+elm+v+gLt+++vkSHLQ PKA63433.1 145 KQRRCWCPDLHGKFLRALEELGGSQAATPKQIRELMNVEGLTIDEVKSHLQ 195 79************************************************* PP
2	Myb_DNA-binding	29.5	1.7e-09	147	196	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r W ++++ ++++a ++lGg t+k I + m+ +g+t ++ks++q PKA63433.1 147 RRCWCPDLHGKFLRALEELGGSqaaTPKQIRELMNvEGLTIDEVKSHLQV 196 56799*************99************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MAVGKGKGVH QDYVEALEEE RRKIQMFARE LPLCLHLVDE SPSHNKPDWL RSVQLWGSPE 60 AEEPPAGGST LRKPVAVNAR KIRGAFQPFE RERQALAGWF PSSSAPPVIS VRNMANTFRG 120 RGDVGPEEKE KERGELLAPA APHRKQRRCW CPDLHGKFLR ALEELGGSQA ATPKQIRELM 180 NVEGLTIDEV KSHLQVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	1e-31	G2-like family protein