PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63534.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 133aa    MW: 14776.8 Da    PI: 8.0692
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.55.5e-095299455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                +h+ +Er RR+riN+++  L++l+P +     k +  a +L + ++Y++sLq
  PKA63534.1 52 SHSLAERVRRERINERMRCLQDLVPGC----YKTMGMARMLDEIINYVQSLQ 99
                8*************************9....35599999*********9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MGPFEGFDHR EVPVGGGSPS SSEGCGMGNS KEGEKPKKVV HVRARRGQAT DSHSLAERVR  60
RERINERMRC LQDLVPGCYK TMGMARMLDE IINYVQSLQN QIEFLSMKLS AATSYGFNLD  120
LEDNSAVKNV IIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.11e-37bHLH family protein