PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63542.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 195aa    MW: 20010.4 Da    PI: 10.2147
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.00024668123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++C + F ++  L  H++ H
  PKA63542.1 46 YECQYCYREFANSQALGGHQNAH 68
                99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MSKYQHQGKH SSQAAIPRLK LFGFAVSKGH DLTPTTAAGV GDGRKYECQY CYREFANSQA  60
LGGHQNAHKK ERQCLKRVQL HHAAIAAVVP SSETHTAAGN PNASALTPPA TASVTSALPG  120
APPSQFVAHG CIFPSSSYRR RTLSLYHGGG GGGGGGGSEA VSGAASLVRL AAPSNRAGSD  180
DSLGLNLQLR LAPAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.11e-15C2H2 family protein