PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA63630.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

LBD

Protein Properties

Length: 159aa MW: 16994.4 Da PI: 8.6056

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA63630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	114.3	7.7e-36	34	134	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aC++C+++rrkC+++C+lapyfpa ++++f+n+h++FG++++l++l+ + +++r +am++++++A+ar rdP G++++i+++q+++++++ael+++++ PKA63630.1 34 ACCSCRHQRRKCVSGCALAPYFPAGEEANFENAHRIFGVAKILRILELVAPDQRAAAMRAVIFHANARSRDPAGGCTRLISDMQRHIDRARAELHRINQ 132 7***********************************************************************************************999 PP DUF260 100 el 101 ++ PKA63630.1 133 QI 134 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
MNSLTSKIPN PNPSSLSPAV ISSTAAAANS GSTACCSCRH QRRKCVSGCA LAPYFPAGEE 60 ANFENAHRIF GVAKILRILE LVAPDQRAAA MRAVIFHANA RSRDPAGGCT RLISDMQRHI 120 DRARAELHRI NQQINCFEMQ MAAAAANTLS DGAALDWGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	4e-26	LBD family protein