PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA63673.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 248aa MW: 27640.9 Da PI: 6.9289

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA63673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.9	2.1e-28	119	177	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K k+s++pr+YYrC+ +C vkkkver+++dp +v+++Yeg Hnhe PKA63673.1 119 LDDGYKWRKYGKKALKSSPNPRNYYRCANLECGVKKKVEREKSDPCYVITVYEGIHNHE 177 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MEFTEASGSS SLSSFQLSEH TAGGGYESSL ADYAASMQSE LGVPDYVQLD EGYSLLADYS 60 LTIAGELKAA VLPGSTETRP NEPERYAGRR KGHIKMMKRK SVEEDFRVGF RTKSEIEKLD 120 DGYKWRKYGK KALKSSPNPR NYYRCANLEC GVKKKVEREK SDPCYVITVY EGIHNHETPE 180 ETAAAKHPLL ITCHHAQQQQ QCQASSSFAI DTWSPRLSHG GKCLKIRDDD PSPFFESSCS 240 YSSLGSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	1e-31	WRKY family protein