PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63739.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 627aa    MW: 67207.4 Da    PI: 5.1748
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63739.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS455.14.3e-1392406101374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv+ L++cAeav++++ ++a+ +L+++s l  ++g +m+++a yf+eALa+r++r        l+p+++ + +s+ +   +  f+e +P+lkf+h+taN
  PKA63739.1 240 LVHGLMACAEAVQQENYKAADVILKQISMLTPSQGGAMRKVAGYFAEALARRIYR--------LNPQQDCSLDSAFSDILQMHFYESCPYLKFAHFTAN 330
                 6899***************************************************........88888886666666666667**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea++g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpps+R+Tg+g+p+++++++l+++g++La++A++++v+fe++ +va++l+dle+ +L+ +p
  PKA63739.1 331 QAILEAFAGCRRVHVIDFGMKQGMQWPALMQALALRPGGPPSFRLTGIGPPQPDNTDALQQVGWKLAQLADTIHVDFEYRGFVANSLADLEPYMLESSP 429
                 ***********************************************************************************************9999 PP

        GRAS 199 ........gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
                          E++a+n+v+++hrll+++++l++    vL +v+ ++P++v++veqea+hn+++Flerf+eal+yys++fdsle + + e+++++++++++
  PKA63739.1 430 aenggsyePEVVAINSVFEIHRLLSRPGALDK----VLATVRAVKPRIVTIVEQEANHNASPFLERFTEALHYYSTMFDSLEGGCSGEAQQDHMMSEVY 524
                 999999999***************88888888....*************************************************************** PP

        GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 lgr+i+n+v+ceg er+erhetl++Wr rl  aGF+pv+l+ +a kqa++ll+ ++ +dgyrvee++g+l lgW++rpL+++SaWr
  PKA63739.1 525 LGRQICNIVSCEGPERTERHETLGQWRGRLAGAGFEPVHLGFNAFKQASMLLALFAgGDGYRVEEKEGCLSLGWHTRPLIATSAWR 610
                 *************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    
MKRDRGESGG GGAIGNYPPA AVKGKMMGME EDSDAGIDEL LAALGYKVRS SDMADVAQKL  60
EQLEMAIGSS AAPDDSLLTH LASDTGHYNP SDLSNWLESM LSEVNLPPPN ESGGFDLHST  120
SAFFDPADNL ATTDSSTLTS VNFSGPPARI LPHDYAHQPV NGGNNRVAYA SERQLGGGST  180
ERKRMRALSS SSSTRGGSGG GAPVSAPKGV ASGQSSACGT EASSAIPVVM LDTQEAGIRL  240
VHGLMACAEA VQQENYKAAD VILKQISMLT PSQGGAMRKV AGYFAEALAR RIYRLNPQQD  300
CSLDSAFSDI LQMHFYESCP YLKFAHFTAN QAILEAFAGC RRVHVIDFGM KQGMQWPALM  360
QALALRPGGP PSFRLTGIGP PQPDNTDALQ QVGWKLAQLA DTIHVDFEYR GFVANSLADL  420
EPYMLESSPA ENGGSYEPEV VAINSVFEIH RLLSRPGALD KVLATVRAVK PRIVTIVEQE  480
ANHNASPFLE RFTEALHYYS TMFDSLEGGC SGEAQQDHMM SEVYLGRQIC NIVSCEGPER  540
TERHETLGQW RGRLAGAGFE PVHLGFNAFK QASMLLALFA GGDGYRVEEK EGCLSLGWHT  600
RPLIATSAWR VAGSSSSTES LSSGDAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein