PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63774.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 207aa    MW: 22137.3 Da    PI: 9.0524
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.79.8e-09122162954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PKA63774.1 122 ARHRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 162
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MDPNFFTSPP PPAETPADWM AIVMQMEKLA ELSDQPLPPP SSIYNLPSSP PAFSATLPAT  60
IPSTNFAGDS PPAAFGQVSV AAMREMIFRI AAMQPVHIDP ESIKPPKRRN VKISKDPQSV  120
AARHRRERIS EKIRILQRLV PGGTKMDTAS MLDEAIHYVK FLKTQVQSLE RAASGGFSFP  180
PASAAAAFAS GHYGYGAGGF AGDVSGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.16e-49bHLH family protein