PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA63894.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 420aa MW: 47724.8 Da PI: 6.7863

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA63894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158.6	2.5e-49	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGf FhPtd el+++yLk+k g ++++ evi+ vdiyk+ePwdLp+ ++++++++w+fF++ ++ky++g r+nrat++gyWk+tgkd++++ ++ PKA63894.1 13 LPPGFGFHPTDVELISHYLKRKNLGLEIDF-EVIPVVDIYKCEPWDLPAycSISTRDSKWHFFTSCHRKYPNGLRSNRATEAGYWKSTGKDRNIKF-NN 109 79**************************.99***********5457777899*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +g kktLvf+kgr p g++tdW+mhey++ PKA63894.1 110 QIIGSKKTLVFHKGRPPYGKRTDWIMHEYHM 140 9**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MAVEIEALKA ISLPPGFGFH PTDVELISHY LKRKNLGLEI DFEVIPVVDI YKCEPWDLPA 60 YCSISTRDSK WHFFTSCHRK YPNGLRSNRA TEAGYWKSTG KDRNIKFNNQ IIGSKKTLVF 120 HKGRPPYGKR TDWIMHEYHM AGKEGQTSSG VKNTFVLCRV SKRDSIEVKA EYDSRQSNEI 180 ESNPQLKYPN ATVVQEKSSH SENLKDLDAC FEELLDPTSC KSSDSSFMSH RTSAELKSEP 240 QSSQADIGAL TPKDDDPLDY GFLPEEIFAI LRDDFASMPQ ITDLLGVDNC SSPFSNDQVS 300 SHSEDLKEQA CNQREDCEFT GIQIRKRRKG PASESSHHRF KLQVQTAKLE MRTNKSASQT 360 ISFIHKDHII SSYCSSPEHF GIYSSLMGFS LLLLYNWHEL LVLGSLRDGD CRFVHLLLHP

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MAVEIEALKA ISLPPGFGFH PTDVELISHY LKRKNLGLEI DFEVIPVVDI YKCEPWDLPA  60
YCSISTRDSK WHFFTSCHRK YPNGLRSNRA TEAGYWKSTG KDRNIKFNNQ IIGSKKTLVF  120
HKGRPPYGKR TDWIMHEYHM AGKEGQTSSG VKNTFVLCRV SKRDSIEVKA EYDSRQSNEI  180
ESNPQLKYPN ATVVQEKSSH SENLKDLDAC FEELLDPTSC KSSDSSFMSH RTSAELKSEP  240
QSSQADIGAL TPKDDDPLDY GFLPEEIFAI LRDDFASMPQ ITDLLGVDNC SSPFSNDQVS  300
SHSEDLKEQA CNQREDCEFT GIQIRKRRKG PASESSHHRF KLQVQTAKLE MRTNKSASQT  360
ISFIHKDHII SSYCSSPEHF GIYSSLMGFS LLLLYNWHEL LVLGSLRDGD CRFVHLLLHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	2e-62	NAC family protein