PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA63985.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YA
Protein Properties Length: 194aa    MW: 21448.1 Da    PI: 9.9355
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA63985.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA106.71.9e-33102158158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep+YVNaKQy++Il+RRq+Rak+e+e+kl +k+rkpy+heSRh hA+rR+Rg+gGrF
  PKA63985.1 102 EEPVYVNAKQYHGILRRRQSRAKAESENKL-IKCRKPYIHESRHLHAMRRARGTGGRF 158
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MTPAVINLTK SDRPNEQQKQ SQVDGQPSAN GNVQPGVAMP STVHMISRGQ LEAGHIMAPV  60
PYPYIDPYFG GIFAAYGGQP VLHPHLMGIV QPGVPLPTDT VEEPVYVNAK QYHGILRRRQ  120
SRAKAESENK LIKCRKPYIH ESRHLHAMRR ARGTGGRFLN SKAKGDQQDG HSSEDKTPNT  180
QNPPSEEQQT NNSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.24e-51NF-YA family protein