PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA64175.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family YABBY
Protein Properties Length: 224aa    MW: 24475.2 Da    PI: 7.5782
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA64175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY232.78.9e-72171846170
       YABBY   6 sseqvCyvqCnfCntilavsvPstslfkv.vtvrCGhCtsllsvnlakasqllaaeshldeslkee...lleelkveeenlksnvekeesastsvssek 100
                  seq+Cyv+CnfC+t+lavsvP++slfk+ vtvrCGhCt+llsvn++       a ++l+ s+++    ++++l  e        +++++ ++++++  
  PKA64175.1  17 PSEQLCYVHCNFCDTVLAVSVPYASLFKTsVTVRCGHCTNLLSVNMRGLLLPA-AANQLHLSTHPFlapVQHNLLEELACPPPSLMMDQQCMNQHNVAP 114
                 68*************************9769************9988776443.444566555554333677776666666666677777777777778 PP

       YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                  ++  +ee+p++p v+rPPekrqrvPsaynrfik+eiqrikasnPdi+hreafsaaaknWahfP+ihfgl
  PKA64175.1 115 PPKAVEEELPQIPVVNRPPEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHFGL 184
                 89******************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MSSSSAAFSL DHLSPPPSEQ LCYVHCNFCD TVLAVSVPYA SLFKTSVTVR CGHCTNLLSV  60
NMRGLLLPAA ANQLHLSTHP FLAPVQHNLL EELACPPPSL MMDQQCMNQH NVAPPPKAVE  120
EELPQIPVVN RPPEKRQRVP SAYNRFIKDE IQRIKASNPD ITHREAFSAA AKNWAHFPHI  180
HFGLMPDQAL KKAASVRPPV ADDGLLKDGF YAAAAAANMG IAPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-75YABBY family protein