PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA64189.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 385aa    MW: 41264.2 Da    PI: 6.1906
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA64189.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.31e-18305339135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+ kTp+WR gp g ktLCnaCG+++++ +l
  PKA64189.1 305 CTHCGVQKTPQWRAGPHGAKTLCNACGVRFKSGRL 339
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MLHQMLLSPR PFSPSPSLPC SLRHSSSAFA LSAGRLLPSP PTNAFSAQGE MEDMKGMHSS  60
ALHMGFSGDE VGEAAWAAER GNLLAEEFQV EDLLDLRGLL ESEEEDEDEE EDEETARVDF  120
TGTKPKPSAV TEEEPSSLSE ISLPEEPDAA HLEWLSRFFE DCQPEFQPQT FPSPAKYSVS  180
GCQKPAPSIS SSTAPGAPIK AKRSKRSRGD GAVWTRSGPP VVADSPPTSS ITGDGSSPAP  240
SSSSSSSSSS ISSTYISFEP SPAAAVVFLD ETPPPPKKHM PKKRGRKPKN PLAAAGSFAT  300
GDRCCTHCGV QKTPQWRAGP HGAKTLCNAC GVRFKSGRLL PEYRPACSPT FVSNVHSNSH  360
RKVLEMRRKK EEQLLPVSPP PVPSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36240.11e-38GATA family protein