PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64222.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB

Protein Properties

Length: 248aa MW: 27238.7 Da PI: 6.3488

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l ++v+++G+g +W + +++ g++R++k+c++rw++yl PKA64222.1 14 RGPWSPEEDSALRRYVELHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	39.2	1.6e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T eEd+ + + k G++ W+ Ia+ ++ gRt++++k++w++ PKA64222.1 69 GGFTDEEDDVIFSLYKSIGSR-WSIIASQLP-GRTDNDVKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MGRAPCCDKA NVRRGPWSPE EDSALRRYVE LHGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPDIRHGG FTDEEDDVIF SLYKSIGSRW SIIASQLPGR TDNDVKNYWN TKLKKKIMAA 120 GEPLITKTHH QSLSPLPAVP APTVNVEVFF PNDIENTTSA LAPVNSCNLG YPFGLPQLPP 180 ADDVSASSSA SSSSIPVASE NFDDFFLPEL GFSYWNTDLL TAGFSSPSYP PLMATCANSE 240 VEHQGIYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	1e-72	MYB family protein