PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64231.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 343aa MW: 38298.1 Da PI: 6.0472

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64231.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	27.9	4.8e-09	112	132	2	22
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 dDg++WrKYGqK++ g++fpr PKA64231.1 112 DDGHSWRKYGQKDILGARFPR 132 8*******************9 PP
2	WRKY	43.8	5e-14	176	217	21	59
-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 21 prsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrCt++ gCp+ k+++rs+e+ +v++i+Y+g+H+++ PKA64231.1 176 YRAYYRCTHRktqGCPAMKQIQRSDENHSVFDIIYRGTHTCS 217 59*****98999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MEGSAATVIA ELTQLHELAR KLGDHLDPCQ IELCRSIAQE IVCSVEKAIR QAKSSAAGGA 60 ESLFSKNRAL ETDELDLLLN DNELQMPKKR KMLPKWTSRA SSITGGGEGL PDDGHSWRKY 120 GQKDILGARF PRLVSKDQPL LPALVNISFL NCLKLYDEMI DDKLKAFSNS LDISSYRAYY 180 RCTHRKTQGC PAMKQIQRSD ENHSVFDIIY RGTHTCSPVS QQNAQRSRHQ YPSLGLLDQQ 240 KSWQLQFDLK NCLKVKTESS DSSENPDPTS SFSFTSTPTQ GMKNDADLFS SLNPECDYVD 300 SLSSALMLPT NSGPNCFPWS PCEMSSHGEI DHDIPFDTSI FFA

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MEGSAATVIA ELTQLHELAR KLGDHLDPCQ IELCRSIAQE IVCSVEKAIR QAKSSAAGGA  60
ESLFSKNRAL ETDELDLLLN DNELQMPKKR KMLPKWTSRA SSITGGGEGL PDDGHSWRKY  120
GQKDILGARF PRLVSKDQPL LPALVNISFL NCLKLYDEMI DDKLKAFSNS LDISSYRAYY  180
RCTHRKTQGC PAMKQIQRSD ENHSVFDIIY RGTHTCSPVS QQNAQRSRHQ YPSLGLLDQQ  240
KSWQLQFDLK NCLKVKTESS DSSENPDPTS SFSFTSTPTQ GMKNDADLFS SLNPECDYVD  300
SLSSALMLPT NSGPNCFPWS PCEMSSHGEI DHDIPFDTSI FFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23810.1	3e-27	WRKY family protein