PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA64364.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Trihelix
Protein Properties Length: 319aa    MW: 35208.3 Da    PI: 4.8831
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA64364.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix84.31.5e-2626103173
    trihelix   1 rWtkqevlaLiearremeerlr.....rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 
                 rWt+qe+l+Lie++r +e+r r     +++  +p+W++vs+++r++g++r+p+qC+++w+nl+++y+kike+e +r+ 
  PKA64364.1  26 RWTRQEILVLIEGKRVVESRGRgraaaAAAPVEPKWAAVSAYCRRHGVNRGPVQCRKRWSNLAGDYRKIKEWEAGRAG 103
                 8*******************9954332245889****************************************99843 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MANAAVVAGL AAGNGSEVGR VPRLPRWTRQ EILVLIEGKR VVESRGRGRA AAAAAPVEPK  60
WAAVSAYCRR HGVNRGPVQC RKRWSNLAGD YRKIKEWEAG RAGRGEAESF WMIRNDVRRE  120
RKLPGFFDRE VYDILDGAAP MEALVAVAMA GAGAGKKVEE EDEDVVFDSG RSAADDGLFS  180
DFEEDKEAEE EEEDNGAVAP FAVAPISEKK LESFHQQCSN PGASKDKQQD EAENSISNSL  240
EPEMQKRRRT SPQVDDDDIS LHSKLIEILD RNNKMLIAQL EAQNINSQLD REQRKDQADG  300
LLSVLNKLAD ALGRIADKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.15e-78Trihelix family protein