PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA64366.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family BBR-BPC
Protein Properties Length: 77aa    MW: 8747.26 Da    PI: 11.2588
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA64366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind104.92.4e-322377247301
   GAGA_bind 247 stkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 ++kr+gaRiagrKmSqgaf k+LekLa+eG+++  p+DLk +WAkHGtnkfvtir
  PKA64366.1  23 NAKRKGARIAGRKMSQGAFAKVLEKLAGEGHQFKDPIDLKLFWAKHGTNKFVTIR 77 
                 579***************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
MEFTLISPAF RRLCVHALEH NNNAKRKGAR IAGRKMSQGA FAKVLEKLAG EGHQFKDPID  60
LKLFWAKHGT NKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68120.16e-27BBR-BPC family protein