PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA64398.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family HSF
Protein Properties Length: 253aa    MW: 29428.6 Da    PI: 10.0967
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA64398.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.24.3e-36481382101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++ +isws+++nsfvv+d++ fa ++Lp+yFkh+nf+SFvRQLn+YgF+kv++++         weF+++ F +g+k+ll+ ik
    PKA64398.1  48 FLTKTYDVVDDPSTDPVISWSRTNNSFVVWDPHAFAVTLLPRYFKHNNFSSFVRQLNTYGFRKVDSDR---------WEFANDGFLRGQKHLLKAIK 135
                   9********************999*****************************************999.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
    PKA64398.1 136 RRK 138
                   *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEPQKNIVKE EYPDEYSAAE PSSVTRYSKA AAKPRPMEGL HDPGPTPFLT KTYDVVDDPS  60
TDPVISWSRT NNSFVVWDPH AFAVTLLPRY FKHNNFSSFV RQLNTYGFRK VDSDRWEFAN  120
DGFLRGQKHL LKAIKRRKPP PHSPSQQQSL GPFLELGHFG LEGEVEQLKR DKSILMAELV  180
KLRQEQQNSL AYLRAIEDRI LGTEQKQQQM MVFLARALRS PDFLQQLLQQ KEKWKELEET  240
ISKKRRRPMS VKS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131137LKAIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.14e-92HSF family protein