PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64412.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 862aa MW: 98458.4 Da PI: 6.9825

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.8	6.4e-17	102	185	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+ YA +vGF v ++ks+ + + g + + +vC+k gk +e+ ++r++ +t+C+a+++vk++ dg ++++ +l+HnH+ + PKA64412.1 102 SFYKLYALRVGFGVAVKKSSFT-QYGLCRRLVLVCTKGGKGRENACY-----QSRPTAKTDCQAMIVVKLWGDGLLHLMEANLDHNHPTS 185 5**************99998.7778************9999.....99*******************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 862 aa Download sequence
MFLAMADDSI LEEALDEDND AISSKDHVYT ENHREKAAKE AGIGIIPAIN VGVMNVDEVV 60 NLRCVADGMN KVEMDMDERG VVMDGRTPQV GMVFKSYEEV VSFYKLYALR VGFGVAVKKS 120 SFTQYGLCRR LVLVCTKGGK GRENACYQSR PTAKTDCQAM IVVKLWGDGL LHLMEANLDH 180 NHPTSPSAAR FLKCYKKMSS RMTKDMIVRT GGHESITLDK ESMDFIGGGR LMLGEGDSEA 240 IHQFFTKIQA KSANFFYLMD LDVEGRVRNV LWADARSRAA YQYFGDVVTF DTSYIEHKHK 300 IPLVLFIGAN HHGQSILLGC GLISEQVVEN YTWLLRTWLT CVQGCAPSAL ITDESKVVKD 360 AVSEVFPNTR HRICLWRMIN NVKGKLKEFR EYKSIKRTLI KVVFDSSQVD EFEENWSKLI 420 KGFGLEDNGY FCSLYEIRSL WVPAFLKDTF WAGMSIFHYK ERISSFFEGH VYPETSLQEF 480 LRNYEGILQS KYEMEVQADH ESFHKASLFV PKFHMEEQLS KLYTQNLFKI FQDELKGSLY 540 CQVSLIKVDA SISTFQVREC TYINDVEKTM SKEYDVLYNI DGFQVHCSCG FFQFRGILCR 600 HALSVLKLQQ VYEIPARYII DRWRKDFKLL IAMSRKTKDV VSNNLIERYD NLSMRCLNLV 660 DVGVMSDEKY QLALKLIRDL EKSLLDDNIF RDLHRRLLPF DHRLSESDEN QALHEYGVYE 720 ENKNSTSLPM KRRGRPPKKA KETNLESLPS SNKGKDTLGA SLVDNQNIML QAASNASHLG 780 AQIRIASGVN LMEVNPNELS FGTHFGIYGN PQDHVSNHSS LQPTSSLQNQ FGQQTIGNQP 840 GVQWIYQQII QEDQSNFGRR PG

Sequence ? help Back to Top

Protein Sequence Length: 862 aa Download sequence

MFLAMADDSI LEEALDEDND AISSKDHVYT ENHREKAAKE AGIGIIPAIN VGVMNVDEVV  60
NLRCVADGMN KVEMDMDERG VVMDGRTPQV GMVFKSYEEV VSFYKLYALR VGFGVAVKKS  120
SFTQYGLCRR LVLVCTKGGK GRENACYQSR PTAKTDCQAM IVVKLWGDGL LHLMEANLDH  180
NHPTSPSAAR FLKCYKKMSS RMTKDMIVRT GGHESITLDK ESMDFIGGGR LMLGEGDSEA  240
IHQFFTKIQA KSANFFYLMD LDVEGRVRNV LWADARSRAA YQYFGDVVTF DTSYIEHKHK  300
IPLVLFIGAN HHGQSILLGC GLISEQVVEN YTWLLRTWLT CVQGCAPSAL ITDESKVVKD  360
AVSEVFPNTR HRICLWRMIN NVKGKLKEFR EYKSIKRTLI KVVFDSSQVD EFEENWSKLI  420
KGFGLEDNGY FCSLYEIRSL WVPAFLKDTF WAGMSIFHYK ERISSFFEGH VYPETSLQEF  480
LRNYEGILQS KYEMEVQADH ESFHKASLFV PKFHMEEQLS KLYTQNLFKI FQDELKGSLY  540
CQVSLIKVDA SISTFQVREC TYINDVEKTM SKEYDVLYNI DGFQVHCSCG FFQFRGILCR  600
HALSVLKLQQ VYEIPARYII DRWRKDFKLL IAMSRKTKDV VSNNLIERYD NLSMRCLNLV  660
DVGVMSDEKY QLALKLIRDL EKSLLDDNIF RDLHRRLLPF DHRLSESDEN QALHEYGVYE  720
ENKNSTSLPM KRRGRPPKKA KETNLESLPS SNKGKDTLGA SLVDNQNIML QAASNASHLG  780
AQIRIASGVN LMEVNPNELS FGTHFGIYGN PQDHVSNHSS LQPTSSLQNQ FGQQTIGNQP  840
GVQWIYQQII QEDQSNFGRR PG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-126	FAR1 family protein