PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64502.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 235aa MW: 26100.4 Da PI: 9.7548

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64502.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.8	1.9e-32	155	213	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ PKA64502.1 155 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDSCRVKKRVERLAEDPRMVITTYEGRHAHS 213 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MLPSAAGVVF NQLGFAEVHE APAMEPSPMS FTLHPSPLLH HFAFSPLALF QNPTFAASSA 60 VALAGGGRLA SSSSSSVLPL RVFEADSPAY TSHANQCSDG ISANEYNTSN NITVNQKSHR 120 VSSSLSVSAM RMKKVKRKVR EPRFCFKTMS EVDVLDDGYK WRKYGQKVVK NTQHPRSYYR 180 CTQDSCRVKK RVERLAEDPR MVITTYEGRH AHSPSRDEDE HTQASSSSKL ASFLW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	140	KVKRKVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	3e-51	WRKY family protein