PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA64580.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 169aa    MW: 18639.1 Da    PI: 11.2031
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA64580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.12.8e-193973135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                Cs C+t++TplWR+gp g+++LCnaCG++yrk+++
  PKA64580.1 39 CSDCRTKNTPLWRSGPAGPRSLCNACGIRYRKRRK 73
                ********************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MVPISGGART RVVAGRRTKA EKHREEIMAE AGEDSSRACS DCRTKNTPLW RSGPAGPRSL  60
CNACGIRYRK RRKSDSNGRE GRNPASWSRA NGGSSASDAA ALNAEEMKRR QREKQEKLLL  120
VLLEHRKQDK IRRRRGWSRA SSAGGADSKE VMEAALLLLS LSSDMSVQC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26930.12e-16GATA family protein