PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA64612.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

HSF

Protein Properties

Length: 420aa MW: 47497.4 Da PI: 5.1365

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA64612.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.9	4.4e-35	14	104	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+led+++++++sws++g+sfvv+++ efa+++Lpk Fkhsnf+SF+RQLn+YgF+k++ ++ weF++++F +g+++ll++i+ PKA64612.1 14 FLTKTYEMLEDASTNSIVSWSSSGRSFVVWNPLEFARDLLPKNFKHSNFSSFIRQLNTYGFRKIDPDQ---------WEFANDEFIRGQRHLLKSIH 101 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k PKA64612.1 102 RRK 104 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MEGSPGGSSS PAPFLTKTYE MLEDASTNSI VSWSSSGRSF VVWNPLEFAR DLLPKNFKHS 60 NFSSFIRQLN TYGFRKIDPD QWEFANDEFI RGQRHLLKSI HRRKPIHSHS VPPQGNNVTA 120 PLSESERQEL DDEIERLRHE KGSLIVDLQK HAQHQHEIEQ QMQSLEERLK DMLLRQRSLV 180 SFLERAVQRP GFLSDLIQQS DLHNKKRRLP KNNFFHEDVS VQDDKNPSLP GLSAEKPDIS 240 SMPLLDVEPF EKMESSLNSL EFFFREVGQA SGEDAFFDDR APCLTSVVSP TLMHASSGET 300 DVNMQSSSHN SAEDINSSIQ NNPVPARTVQ TGIDMNSKPT IHSRSEEPGN AAATVPTGVN 360 DTFWEQFFTE SPGSCDTQEA QSERKESEDQ RSDGNGWWSR KSVDHLTERM GSLTPAERTS

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MEGSPGGSSS PAPFLTKTYE MLEDASTNSI VSWSSSGRSF VVWNPLEFAR DLLPKNFKHS  60
NFSSFIRQLN TYGFRKIDPD QWEFANDEFI RGQRHLLKSI HRRKPIHSHS VPPQGNNVTA  120
PLSESERQEL DDEIERLRHE KGSLIVDLQK HAQHQHEIEQ QMQSLEERLK DMLLRQRSLV  180
SFLERAVQRP GFLSDLIQQS DLHNKKRRLP KNNFFHEDVS VQDDKNPSLP GLSAEKPDIS  240
SMPLLDVEPF EKMESSLNSL EFFFREVGQA SGEDAFFDDR APCLTSVVSP TLMHASSGET  300
DVNMQSSSHN SAEDINSSIQ NNPVPARTVQ TGIDMNSKPT IHSRSEEPGN AAATVPTGVN  360
DTFWEQFFTE SPGSCDTQEA QSERKESEDQ RSDGNGWWSR KSVDHLTERM GSLTPAERTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	3e-84	HSF family protein